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PATN1 coat pattern modifier (PATN1)

Summary

Palouse ponies, Appaloosas and other spotted and varnish roan horses with the Lp gene can have vastly different white markings to one another. In horses positive for Lp, the PATN1 gene is strongly associated with patterns showing large amounts of white.

While the PATN1 is strongly associated with large amounts of white, it is not thought to cause the markings.

Horses that are not positive for Lp can also be tested for PATN1. It does not affect their colour, but may be useful if you are hoping for a beautifully marked spotted foal.

Gene or region and technical reference

Gene: RFWD3 (marker). Reference: Holl et al. (2015)

Reported alleles

n. Test developed using manufactured DNA, animal controls.

PATN1. Test developed using manufactured DNA, animal cases.

Panels: groups of tests that are often ordered together

This test is in the full colour panel.

This test is in the Gypsy health & colour panel.

This test is in the Miniature health & colour panel.

This test is in the patterns panel.


horse

The PATN1 gene is associated with more white patterning in horses that are also positive for Lp.

Order tests

There is a one-off sample processing fee of $40 per animal plus the cost of your tests.

How many animals are you testing? Discount or society code:


Pedigree

$33 DNA profile ... more


Panels


Colour panels

$40 Dilutions panel ... more

$120 Full colour panel ... more

$70 Patterns panel ... more


Panels by breed

$115 Arabian health & colour ... more

$50 Arabian health panel ... more

$40 Friesian health & colour ... more

$120 Gypsy health & colour ... more

$50 Miniature ACAN panel ... more

$250 Miniature health & colour ... more

$160 QH health & colour ... more

$90 QH health panel ... more


Good moves


Gaited horses

$9 Lateral gait marker ... more


Good looks


Coat colour

$9 Agouti (bay factor) (agouti) ... more

$9 Red/black ... more


Coat pattern

$9 Frame overo/lethal white syndrome (OLWS) ... more

$9 Grey/melanoma ... more

$9 Lp/Appaloosa/night blindness (CSNB) ... more

$9 PATN1 coat pattern modifier (PATN1)

$9 Roan marker ... more

$9 Sabino 1 ... more

$9 Splashed white 1/deafness (SW1) ... more

$9 Splashed white 2/deafness (SW2) ... more

$9 Splashed white 3/deafness (SW3) ... more

$9 Tobiano ... more

$9 W13 dominant white (W13) ... more

$9 W20 white markings (W20) ... more

$9 W22 dominant white (W22) ... more

$9 W25 dominant white (W25) ... more

$9 W26 dominant white (W26) ... more

$9 W27 dominant white (W27) ... more


Good health


Paint horses

$9 Splashed white 3/deafness (SW3) ... more


Good looks


Colour dilution

$9 Champagne ... more

$9 Cream ... more

$9 Dun and d1 (nd1) (dun/d1) ... more

$9 Pearl ... more

$9 Taffy/silver/eye abnormalities (MCOA/silver) ... more


Good health


Multiple breeds

$14 Foal immunodeficiency syndrome (FIS) ... more

$14 Fragile foal syndrome (FFS) ... more

$9 Frame overo/lethal white syndrome (OLWS) ... more

$9 Grey/melanoma ... more

$9 Lp/Appaloosa/night blindness (CSNB) ... more

$14 Polysaccharide storage myopathy 1 (PSSM1) ... more

$9 Splashed white 1/deafness (SW1) ... more

$9 Taffy/silver/eye abnormalities (MCOA/silver) ... more


Pure- and part-bred Akhal-Tekes

$14 Naked foal syndrome (NFS) ... more


Pure- and part-bred Arabians

$14 Cerebellar abiotrophy (CA) ... more

$14 Lavender foal syndrome (LFS) ... more

$14 Occipitoatlantoaxial malformation (OAAM) ... more

$14 Severe combined immune deficiency (SCID) ... more


Pure- and part-bred Connemaras

$14 Hoof wall separation disease (HWSD) ... more


Pure- and part-bred Friesians

$14 Friesian dwarfism ... more

$14 Hydrocephalus ... more


Pure- and part-bred Miniature horses

$14 D1 form of Miniature dwarfism (D1) ... more

$14 D2 form of Miniature dwarfism (D2) ... more

$14 D3 form of Miniature dwarfism (D3) ... more

$14 D4 form of Miniature dwarfism (D4) ... more

$140 Skeletal atavism (SA) ... more


Pure- and part-bred Quarter Horses and Paints

$14 Glycogen branching enzyme deficiency (GBED) ... more

$14 Hereditary equine regional dermal asthenia (HERDA) ... more

$14 Hyperkalaemic periodic paralysis (HYPP) ... more

$14 Immune mediated myositis (IMM) ... more

$14 Malignant hyperthermia (MH) ... more

$9 Splashed white 2/deafness (SW2) ... more


Pure- and part-bred Saddlebreds

$14 Junctional epidermolysis bullosa (JEB2) ... more

Tests can be in the list more than once when the gene in question has more than one effect. It is OK to select the same test once or more than once, the price is the same.